WebJan 19, 2024 · The bioinformatics databases (hTFtarget, starBase and TargetScan) were used to predict the upstream and downstream regulatory molecules of E2F7. Then the binding relationships between E2F7 and regulatory molecules were verified by ChIP and dual-luciferase reporter assay. qRT-PCR and western blot were used to detect the … WebOct 3, 2024 · The hTFtarget database is a large-scale database collecting most human transcription factors and their experimentally confirmed target genes in multiple organs . In our study, the transcription factors of GSTM2 in colon tissue was searched using the hTFtarget database.
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WebMay 26, 2024 · To date, several TF databases have been developed to explore this information. For example, TF-target gene regulation databases like TRRUST ( Han et al. … http://bioinfo.life.hust.edu.cn/hTFtarget#!/
WebFeb 22, 2024 · Combined with the hTFtarget and Knock-TF databases, TFAP4 was found to potentially transcriptionally activate EGFR, KIAA0652, HSPA5, RAB7A, HIF1A, and LAMP1 . The RNAInter predicted that ELAVL1 had the highest number of potential hub genes . DGIdb showed that SORAFENIB could act on EGFR, HIF1A, and MAPK1 . WebSep 12, 2024 · Finally, a transcription factor-key gene network was constructed based on ChEA3 platform and hTFtarget database, and a miRNA-key gene network was constructed using starBase and the multimiR R package.
WebNov 16, 2024 · In this study, we constructed a database named hTFtarget, which integrated huge human TF target resources (7,190 ChIP-Seq samples of 659 TFs and high … WebSep 12, 2024 · Finally, a transcription factor-key gene network was constructed based on ChEA3 platform and hTFtarget database, and a miRNA-key gene network was con …
WebApr 10, 2024 · In addition to exploring and analyzing the genomic and epigenetic regulation mechanism of COPZ1 gene expression, we also analyzed the correlation between COPZ1 expression level and its potential regulated transcription factors. One hundred and seventeen potential transcription factors of COPZ1 were downloaded from the hTFtarget …
Web(C) According to the hTFtarget database, the first four TFs of both S100A12 and the 10 interacted genes were found. (D) GO and KEGG pathway analysis of both S100A12 and the 10 interacted genes. download this websiteWebA study has developed a database named hTFtarget by creating a comprehensive TF-target relationship library for humans, which can serve as a useful resource for … claw mark iconWebMay 26, 2024 · To date, several TF databases have been developed to explore this information. For example, TF-target gene regulation databases like TRRUST ( Han et al. , 2024 ), ChIPSummitDB ( Czipa et al. , 2024 ), hTFtarget ( Zhang et al. , 2024 ), SEGreg ( Tang et al. , 2024 ) and FFLtool ( Xie et al. , 2024 ) and databases containing annotation … claw mark seal elden ringWebW3Schools offers free online tutorials, references and exercises in all the major languages of the web. Covering popular subjects like HTML, CSS, JavaScript, Python, SQL, Java, … download this war of mine complete editionWebDATABASE hTFtarget: A Comprehensive Database for Regulations of Human Transcription Factors and Their Targets Qiong Zhang1,#, Wei Liu1,2,#, Hong-Mei … claw-marksWebApr 1, 2024 · The HOCOMOCO , JASPAR , TRANSFAC v2024 , and TFBSbank databases focus on the collection and discovery of the motif profiles for TFBSs, while TRRUST … download this war of mine final cutWebJan 4, 2024 · TCGA, hTFtarget, and MSigDB databases were employed to identify NF- κ B-related metabolic genes (NFMGs). Based on NFMGs, we used consensus clustering … claw marks clipart transparent